Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827815.1_cds_XP_016503233.1_16798
CDS Infomation

[gene=LOC107821307] [db_xref=GeneID:107821307] [protein=probable protein phosphatase 2C 38] [protein_id=XP_016503233.1] [location=join(7032..7332,9278..9645,9774..10010,10420..10644)] [gbkey=CDS]
Sequence

ATGGTTACGTTGTGCTGGAGACCTTCTGTAAAGGGTGATGGTAGCGGGCGAGGAGGAGAT
GCGAATGGGAGGTTTGATGGATTGATGTGGTATAAGGATCTTGGAGTTCATATAAATGGA
GAATTTTCCATGGCAGTGATACAAGCCAATAATTTGATGGAGGATCGGAGTCAGCTCGAA
TCAGGGCCGTTAAGTTCTTTGAAATCAGGACCTCATGGAACATTTATAGGAGTTTACGAT
GGACATGGAGGACCAGAGACATCGCGGTTTATAAACAAAACTCTGTTCTCCAATCTCAAG
AAATTTGCTTCCGAGCATCAAGAAATTTCTGCTGATGCCATAAGGAGAGCTTTCTTGACA
ACTGAAGAGGAATATCTGTCACTTGTAAAGCGACAGTGGAATGAGAAGCCACAGATTGCA
TCAGTAGGATCATGCTGTTTGGCGGGCATAATATGCAGTGGACTACTGTATATCGCGAAT
GTAGGAGATTCACGTGCAGTACTAGGTAGAGTAGATAAAGCTACAAAGAGTATAACAGCT
ATTCAACTGTCAACAGAACACAATGCTAGTATCGAGTCTGTGAGAGACGAGCTTCGCTCG
TTGCATCCTCAGGATTCACGAATTGTGGTTCTCAAACACAAAGTTTGGCGTGTGAAAGGT
CTCATACAGGTTTCAAGGTCAATTGGTGATGCCTATCTTAAGAAGTCAGAGTTTAACCAA
GCACCATTATTGGCAAGATTTAGGTTGCCAGAACCTTTCCCGAAACCAATCCTCAGCGCG
GAGCCATCAATATCCGTTCACAGACTCAGTTCCAAGGATCAATTCGTCATATTTGCTTCA
GATGGTCTATGGGATCATCTTAGCAACCAGGAGGCTGTTGATATTGTCCACAATCATCCT
AGAAATGGAATTGCTAGAAGACTTATTGAAGCTGCTCTACATGTAGCAGCCAAGAAAAGA
GAAATGCGATATTCAGACCTGAAGAAGATTGACCGAGGCGTAAGAAGGCATTTCCATGAT
GATATTACAGTTGTAGTTGTGTTTGTTGATCCATATTCAATGAATAGAAGTTCTTCTCGT
GGTTCAATTCTTTCCATTAGAGGAGGTACTCCCTCCTCCCCAGAGTCCTAA

Peptide Sequence

PEP ID

XP_016503233.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 38 [Nicotiana tabacum]
Sequence

MVTLCWRPSVKGDGSGRGGDANGRFDGLMWYKDLGVHINGEFSMAVIQANNLMEDRSQLE
SGPLSSLKSGPHGTFIGVYDGHGGPETSRFINKTLFSNLKKFASEHQEISADAIRRAFLT
TEEEYLSLVKRQWNEKPQIASVGSCCLAGIICSGLLYIANVGDSRAVLGRVDKATKSITA
IQLSTEHNASIESVRDELRSLHPQDSRIVVLKHKVWRVKGLIQVSRSIGDAYLKKSEFNQ
APLLARFRLPEPFPKPILSAEPSISVHRLSSKDQFVIFASDGLWDHLSNQEAVDIVHNHP
RNGIARRLIEAALHVAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFVDPYSMNRSSSR
GSILSIRGGTPSSPES

Transcript Sequence

Gene sequence data has not been registered.